BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002G06SP1|AL425017
(1040 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1695 0.0
>3x_Contig1769
Length = 25795
Score = 1695 bits (850), Expect = 0.0
Identities = 970/994 (97%), Gaps = 16/994 (1%)
Strand = Plus / Plus
Query: 1 gcccctcgaaccccctaacaccggtagccttgtgcaaaamaggaagctagcagagctctt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4896 gcccctcgaaccccctaacaccggtagccttgtgcaaaacaggaagctagcagagctctt 4955
Query: 61 gcaattggtagcagamaatgggaaaratggattttacaaaggtgtagttgctgaatctat 120
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4956 gcaattggtagcagacaatgggaaagatggattttacaaaggtgtagttgctgaatctat 5015
Query: 121 aatagaagaaatgaaaa-cacgc-ggtggtttaatggatatggtatgatttgtgctgctc 178
||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||
Sbjct: 5016 aatagaagaaatgaaaaacacgccggtggtttaatggatatgg-atgatttg-gctgctc 5073
Query: 179 ataagagtgatttcgttgacccaatatatttggatttcctggagcataaaawttgggaaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5074 ataagagtgatttcgttgacccaatatatttggatttcctggagcataaaatttgggaaa 5133
Query: 239 tacctccaaactctcaagggctcgtagttttacttgcattaggaataataagagagcttg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5134 tacctccaaactctcaagggctcgtagttttacttgcattaggaataataagagagcttg 5193
Query: 299 acaaccagaaattgattaawctgcactcaatgcaaagaaattctgtggagtatttacaca 358
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5194 acaaccagaaattgattaatctgcactcaatgcaaagaaattctgtggagtatttacaca 5253
Query: 359 tgctcattgaatgcctcaagttagccttttatgattcagacgaatatgtgtctgacccta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5254 tgctcattgaatgcctcaagttagccttttatgattcagacgaatatgtgtctgacccta 5313
Query: 419 attgtcaggaagccgacatcctacatcgattactctcaaaggactatttaaagagtcgtg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5314 attgtcaggaagccgacatcctacatcgattactctcaaaggactatttaaagagtcgtg 5373
Query: 479 caaagctattcagccccagtggtatcattgactcttctgttatcaaacatggagttccga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5374 caaagctattcagccccagtggtatcattgactcttctgttatcaaacatggagttccga 5433
Query: 539 acgaagatttcaatcagtcggacacagtatatttwaccgtaagtracccatatgggaatg 598
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 5434 acgaagatttcaatcagtcggacacagtatattttaccgtaagtgacccatatgggaatg 5493
Query: 599 tgacatcgttcataaactctttgtatgatggttttggttcttgtattgtgccacgaactt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5494 tgacatcgttcataaactctttgtatgatggttttggttcttgtattgtgccacgaactt 5553
Query: 659 tcggaggatttgctctacagaatcgtggggccaactttaaccttacaccaggcactaaga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5554 tcggaggatttgctctacagaatcgtggggccaactttaaccttacaccaggcactaaga 5613
Query: 719 actcattagagcctagtaaaagaccctatcatactattattccttccatcattaccagta 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5614 actcattagagcctagtaaaagaccctatcatactattattccttccatcattaccagta 5673
Query: 779 acgatgaatctaccgtttatggaatgggaaatatgggtggtttcatgcaacctagcggcc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5674 acgatgaatctaccgtttatggaatgggaaatatgggtggtttcatgcaacctagcggcc 5733
Query: 839 atgtacaacattttttaaattt-awtctctttgggttgaat-cacaggagt-actggata 895
|||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||
Sbjct: 5734 atgtacaacattttttaaatttaattctctttgggttgaatccacaggagtcactggata 5793
Query: 896 g-ccaagatgttgtctgtct-cacatcc-aagta-tctcatctagaccgagg-agaggat 950
| |||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 5794 gcccaagatgttgtctgtctccacatccaaagtattctcatctagaccgaggcagaggat 5853
Query: 951 -atccgga-ctgtc-acact-ctgtgtctctcat 980
||||||| ||||| ||||| |||||||||||||
Sbjct: 5854 catccggacctgtcaacactcctgtgtctctcat 5887
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5982
Number of Sequences: 1807
Number of extensions: 5982
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 1040
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1024
effective length of database: 10,329,639
effective search space: 10577550336
effective search space used: 10577550336
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)